Painless upgrading of R and bioconductor
Painless upgrading of R and bioconductor
I keep forgetting how to do this, so I thought I would write it down.
* Install new version of R
* Copy old library to new directory e.g. cp -R ~/Library/R/2.15 ~/Library/R/3.0
* Run R
* update.packages(checkBuilt=TRUE, ask=FALSE)
* source("http://bioconductor.org/biocLite.R")
* biocLite(ask=FALSE)
I keep forgetting how to do this, so I thought I would write it down.
* Install new version of R
* Copy old library to new directory e.g. cp -R ~/Library/R/2.15 ~/Library/R/3.0
* Run R
* update.packages(checkBuilt=TRUE, ask=FALSE)
* source("http://bioconductor.org/biocLite.R")
* biocLite(ask=FALSE)
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